Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF15-20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
860672 bp
Thymine Count
854649 bp
Guanine Count
446221 bp
Cytosine Count
438063 bp
Genome Length
2601418 bp
Protein-coding Genes
2503 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yiha family ribosome biogenesis gtp-binding protein | DWW32_11970 | Not Available | Positive | 2341142 - 2341726 | 21978.1 |
| type ii toxin-antitoxin system relb/dinj family antitoxin | DWW32_11975 | Not Available | Positive | 2341811 - 2342116 | 11443.7 |
| yitt family protein | DWW32_11980 | Not Available | Positive | 2342616 - 2343455 | 30656.2 |
| nad(+) synthase | DWW32_11985 | Not Available | Negative | 2343471 - 2345375 | 71803.5 |
| 4fe-4s dicluster domain-containing protein | DWW32_11990 | Not Available | Negative | 2345441 - 2346958 | 54826.5 |
| had family hydrolase | DWW32_11995 | Not Available | Positive | 2347045 - 2347737 | 26583.6 |
| rlua family pseudouridine synthase | DWW32_12000 | Not Available | Positive | 2347724 - 2348611 | 34380.7 |
| cation:proton antiporter | DWW32_12005 | Not Available | Positive | 2348627 - 2349823 | 42484.8 |
| hypothetical protein | DWW32_12010 | Not Available | Positive | 2349789 - 2350337 | 21453.3 |
| rna pseudouridine synthase | DWW32_12015 | Not Available | Negative | 2350310 - 2351101 | 30890.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
