Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF15-20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
860672 bp
Thymine Count
854649 bp
Guanine Count
446221 bp
Cytosine Count
438063 bp
Genome Length
2601418 bp
Protein-coding Genes
2503 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prepilin-type n-terminal cleavage/methylation domain-containing protein | DWW32_11045 | Not Available | Negative | 2174814 - 2175206 | 15679.1 |
| type ii secretion system protein | DWW32_11050 | Not Available | Negative | 2175317 - 2175709 | 14849.2 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | DWW32_11055 | Not Available | Negative | 2175687 - 2175986 | 11219.0 |
| hypothetical protein | DWW32_11060 | Not Available | Negative | 2176000 - 2177088 | 42555.5 |
| competence protein comg | DWW32_11065 | Not Available | Negative | 2176910 - 2177899 | 38065.9 |
| mbl fold metallo-hydrolase | DWW32_11070 | Not Available | Negative | 2177944 - 2178567 | 23010.4 |
| 50s ribosomal protein l33 | DWW32_11075 | Not Available | Negative | 2178607 - 2178756 | 5931.23 |
| penicillin-binding protein 2 | DWW32_11080 | Not Available | Negative | 2178836 - 2180890 | 76000.9 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | DWW32_11085 | Not Available | Positive | 2181015 - 2182064 | 38590.4 |
| deoxyribonuclease iv | DWW32_11090 | Not Available | Negative | 2182078 - 2182917 | 31272.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
