Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF15-20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
860672 bp
Thymine Count
854649 bp
Guanine Count
446221 bp
Cytosine Count
438063 bp
Genome Length
2601418 bp
Protein-coding Genes
2503 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylglycinamide formyltransferase | DWW32_10895 | Not Available | Negative | 2140464 - 2141048 | 21662.6 |
| phosphoribosylformylglycinamidine cyclo-ligase | DWW32_10900 | Not Available | Negative | 2141042 - 2142073 | 36622.3 |
| amidophosphoribosyltransferase | DWW32_10905 | Not Available | Negative | 2142077 - 2143456 | 50857.0 |
| phosphoribosylformylglycinamidine synthase | DWW32_10910 | Not Available | Negative | 2143458 - 2147159 | 136545.0 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | DWW32_10915 | Not Available | Negative | 2147170 - 2147658 | 17022.9 |
| abc transporter substrate-binding protein | DWW32_10920 | Not Available | Negative | 2147951 - 2149609 | 61344.1 |
| glycyl radical protein | DWW32_10925 | Not Available | Negative | 2150014 - 2152431 | 92025.1 |
| glycyl-radical enzyme activating protein | DWW32_10930 | Not Available | Positive | 2152613 - 2153527 | 34512.2 |
| deor/glpr transcriptional regulator | DWW32_10935 | Not Available | Positive | 2153592 - 2154338 | 27946.6 |
| abc transporter substrate-binding protein | DWW32_10940 | Not Available | Negative | 2154818 - 2156500 | 61521.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
