Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF15-20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
860672 bp
Thymine Count
854649 bp
Guanine Count
446221 bp
Cytosine Count
438063 bp
Genome Length
2601418 bp
Protein-coding Genes
2503 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWW32_10845 | Not Available | Positive | 2132681 - 2132818 | 5469.59 |
| lyttr family transcriptional regulator | DWW32_10850 | Not Available | Positive | 2132922 - 2133356 | 17130.3 |
| hypothetical protein | DWW32_10855 | Not Available | Positive | 2133353 - 2134021 | 25223.6 |
| toxin-antitoxin system hicb family antitoxin | DWW32_10860 | Not Available | Negative | 2134031 - 2134405 | 14400.2 |
| type ii toxin-antitoxin system hica family toxin | DWW32_10865 | Not Available | Negative | 2134350 - 2134646 | 11603.2 |
| mate family efflux transporter | DWW32_10870 | Not Available | Negative | 2134781 - 2136139 | 49391.2 |
| methionyl aminopeptidase | DWW32_10875 | Not Available | Negative | 2136167 - 2137033 | 31870.2 |
| nadh peroxidase | DWW32_10880 | Not Available | Negative | 2137129 - 2137698 | 21284.1 |
| hypothetical protein | DWW32_10885 | Not Available | Negative | 2137982 - 2138884 | 34095.9 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase purh | DWW32_10890 | Not Available | Negative | 2138935 - 2140467 | 56245.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
