Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF15-20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
860672 bp
Thymine Count
854649 bp
Guanine Count
446221 bp
Cytosine Count
438063 bp
Genome Length
2601418 bp
Protein-coding Genes
2503 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromosomal replication initiator protein dnaa | DWW32_10535 | Not Available | Positive | 2061951 - 2063318 | 52226.5 |
| dna polymerase iii subunit beta | DWW32_10540 | Not Available | Positive | 2063462 - 2064580 | 41667.7 |
| s4 domain-containing protein yaaa | DWW32_10545 | Not Available | Positive | 2064695 - 2064898 | 7653.19 |
| dna replication/repair protein recf | DWW32_10550 | Not Available | Positive | 2064895 - 2065986 | 43167.4 |
| dna topoisomerase (atp-hydrolyzing) subunit b | DWW32_10555 | Not Available | Positive | 2065983 - 2067950 | 73435.4 |
| dna gyrase subunit a | DWW32_10560 | Not Available | Positive | 2067963 - 2070431 | 92032.8 |
| xre family transcriptional regulator | DWW32_10565 | Not Available | Positive | 2070576 - 2071160 | 22316.9 |
| serine--trna ligase | DWW32_10570 | Not Available | Positive | 2071514 - 2072797 | 49275.6 |
| nucleoside deaminase | DWW32_10580 | Not Available | Positive | 2073002 - 2073472 | 17770.8 |
| dna polymerase iii subunit gamma/tau | DWW32_10585 | Not Available | Positive | 2073579 - 2075342 | 66605.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
