Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF15-20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
860672 bp
Thymine Count
854649 bp
Guanine Count
446221 bp
Cytosine Count
438063 bp
Genome Length
2601418 bp
Protein-coding Genes
2503 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWW32_10325 | Not Available | Negative | 2018044 - 2018253 | 8387.37 |
| n-acetylmuramoyl-l-alanine amidase | DWW32_10330 | Not Available | Positive | 2018445 - 2019149 | 25949.6 |
| nudix hydrolase | DWW32_10335 | Not Available | Positive | 2019203 - 2019715 | 19481.8 |
| atp-grasp domain-containing protein | DWW32_10340 | Not Available | Positive | 2019720 - 2020916 | 46313.6 |
| alpha/beta hydrolase | DWW32_10345 | Not Available | Positive | 2020913 - 2021668 | 28975.5 |
| hypothetical protein | DWW32_10350 | Not Available | Positive | 2021665 - 2022738 | 41728.4 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DWW32_10355 | Not Available | Negative | 2022741 - 2023775 | 38991.7 |
| acyl coa:acetate/3-ketoacid coa transferase | DWW32_10360 | Not Available | Negative | 2023837 - 2025387 | 56057.7 |
| enoyl-coa hydratase | DWW32_10365 | Not Available | Negative | 2025410 - 2026189 | 27511.3 |
| 3-hydroxybutyryl-coa dehydrogenase | DWW32_10370 | Not Available | Negative | 2026254 - 2027090 | 30140.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
