Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF15-20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
860672 bp
Thymine Count
854649 bp
Guanine Count
446221 bp
Cytosine Count
438063 bp
Genome Length
2601418 bp
Protein-coding Genes
2503 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | DWW32_10225 | Not Available | Negative | 1997663 - 1998754 | 41281.8 |
| carbohydrate abc transporter permease | DWW32_10230 | Not Available | Negative | 1998952 - 1999812 | 32241.8 |
| sugar abc transporter permease | DWW32_10235 | Not Available | Negative | 1999824 - 2000705 | 33011.2 |
| carbohydrate abc transporter substrate-binding protein | DWW32_10240 | Not Available | Negative | 2000781 - 2002109 | 48469.2 |
| arac family transcriptional regulator | DWW32_10245 | Not Available | Positive | 2002292 - 2003128 | 32516.8 |
| hypothetical protein | DWW32_10250 | Not Available | Positive | 2003141 - 2003326 | 7228.56 |
| ggdef domain-containing protein | DWW32_10255 | Not Available | Negative | 2003346 - 2004425 | 41596.5 |
| hypothetical protein | DWW32_10260 | Not Available | Negative | 2004426 - 2005694 | 49109.3 |
| thiamine diphosphokinase | DWW32_10265 | Not Available | Negative | 2005698 - 2006291 | 22499.2 |
| ribulose-phosphate 3-epimerase | DWW32_10270 | Not Available | Negative | 2006294 - 2006953 | 24242.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
