Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF15-20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
860672 bp
Thymine Count
854649 bp
Guanine Count
446221 bp
Cytosine Count
438063 bp
Genome Length
2601418 bp
Protein-coding Genes
2503 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWW32_10175 | Not Available | Negative | 1987597 - 1989396 | 69187.9 |
| transcriptional regulator spx | DWW32_10180 | Not Available | Negative | 1989507 - 1989947 | 16527.0 |
| hd domain-containing protein | DWW32_10185 | Not Available | Positive | 1990051 - 1990608 | 21270.6 |
| php domain-containing protein | DWW32_10190 | Not Available | Negative | 1990618 - 1991511 | 33889.3 |
| undecaprenyl-diphosphate phosphatase | DWW32_10195 | Not Available | Negative | 1991521 - 1992336 | 30489.7 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | DWW32_10200 | Not Available | Negative | 1992333 - 1993655 | 50212.8 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | DWW32_10205 | Not Available | Negative | 1993657 - 1994637 | 36445.3 |
| 50s ribosomal protein l28 | DWW32_10210 | Not Available | Positive | 1994784 - 1994975 | 7029.75 |
| hypothetical protein | DWW32_10215 | Not Available | Negative | 1995047 - 1995397 | 13593.6 |
| 1,3-beta-galactosyl-n-acetylhexosamine phosphorylase | DWW32_10220 | Not Available | Negative | 1995501 - 1997645 | 83579.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
