Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF15-20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
860672 bp
Thymine Count
854649 bp
Guanine Count
446221 bp
Cytosine Count
438063 bp
Genome Length
2601418 bp
Protein-coding Genes
2503 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter substrate-binding protein | DWW32_10070 | Not Available | Negative | 1965051 - 1966352 | 49739.8 |
| dna-binding response regulator | DWW32_10075 | Not Available | Negative | 1966355 - 1967008 | 24242.0 |
| sensor histidine kinase | DWW32_10080 | Not Available | Negative | 1967001 - 1968311 | 50456.2 |
| sugar abc transporter substrate-binding protein | DWW32_10085 | Not Available | Negative | 1968308 - 1969288 | 36848.2 |
| hypothetical protein | DWW32_10090 | Not Available | Negative | 1969336 - 1969662 | 12035.8 |
| had-iib family hydrolase | DWW32_10095 | Not Available | Negative | 1969655 - 1970428 | 29606.0 |
| hypothetical protein | DWW32_10100 | Not Available | Negative | 1970428 - 1970970 | 21097.9 |
| paai family thioesterase | DWW32_10105 | Not Available | Positive | 1971049 - 1971480 | 15840.0 |
| molecular chaperone dnaj | DWW32_10110 | Not Available | Negative | 1971495 - 1972607 | 40982.2 |
| molecular chaperone dnak | DWW32_10115 | Not Available | Negative | 1972675 - 1974480 | 65208.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
