Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF15-20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
860672 bp
Thymine Count
854649 bp
Guanine Count
446221 bp
Cytosine Count
438063 bp
Genome Length
2601418 bp
Protein-coding Genes
2503 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts mannose/fructose/sorbose transporter subunit iib | DWW32_09955 | Not Available | Positive | 1929061 - 1929531 | 17316.2 |
| pts sugar transporter subunit iic | DWW32_09960 | Not Available | Positive | 1929556 - 1930332 | 27622.7 |
| pts system mannose/fructose/sorbose family transporter subunit iid | DWW32_09965 | Not Available | Positive | 1930322 - 1931149 | 30075.4 |
| sugar phosphate isomerase/epimerase | DWW32_09970 | Not Available | Positive | 1931218 - 1931528 | 12370.8 |
| dutp pyrophosphatase | DWW32_09990 | Not Available | Negative | 1939522 - 1940004 | 18156.9 |
| dna-deoxyinosine glycosylase | DWW32_09995 | Not Available | Negative | 1939997 - 1940458 | 17891.7 |
| 30s ribosomal protein s12 methylthiotransferase rimo | DWW32_10000 | Not Available | Negative | 1940443 - 1941741 | 49088.0 |
| hd domain-containing protein | DWW32_10005 | Not Available | Negative | 1941738 - 1942676 | 35460.2 |
| glycosyltransferase | DWW32_10010 | Not Available | Negative | 1942673 - 1944640 | 75500.1 |
| upf0104 family protein | DWW32_10015 | Not Available | Negative | 1944644 - 1945684 | 39121.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
