Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF15-20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
860672 bp
Thymine Count
854649 bp
Guanine Count
446221 bp
Cytosine Count
438063 bp
Genome Length
2601418 bp
Protein-coding Genes
2503 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | DWW32_09435 | Not Available | Positive | 1830707 - 1830949 | 9253.39 |
| excisionase | DWW32_09445 | Not Available | Positive | 1831324 - 1831527 | 7967.61 |
| site-specific integrase | DWW32_09450 | Not Available | Positive | 1831605 - 1832795 | 45913.3 |
| hypothetical protein | DWW32_09460 | Not Available | Positive | 1833353 - 1834342 | 38895.7 |
| peptidase t | DWW32_09465 | Not Available | Positive | 1834444 - 1835688 | 46337.0 |
| is1634 family transposase | DWW32_09470 | Not Available | Negative | 1836065 - 1837753 | 66088.5 |
| hypothetical protein | DWW32_09475 | Not Available | Negative | 1837945 - 1839252 | 49770.9 |
| m23 family peptidase | DWW32_09480 | Not Available | Negative | 1839249 - 1840436 | 44528.6 |
| o-antigen ligase family protein | DWW32_09485 | Not Available | Negative | 1840476 - 1841609 | 43209.4 |
| Trna-thr | Not Available | Not Available | Positive | 1841662 - 1841736 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
