Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF15-20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
860672 bp
Thymine Count
854649 bp
Guanine Count
446221 bp
Cytosine Count
438063 bp
Genome Length
2601418 bp
Protein-coding Genes
2503 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| topoisomerase | DWW32_09385 | Not Available | Negative | 1827199 - 1827426 | 8675.72 |
| topoisomerase | DWW32_09390 | Not Available | Negative | 1827437 - 1827554 | 4310.37 |
| hypothetical protein | DWW32_09395 | Not Available | Negative | 1827564 - 1827695 | 4865.11 |
| 23s rrna (adenine(2058)-n(6))-methyltransferase erm(b) | DWW32_09400 | Not Available | Negative | 1827700 - 1828437 | 28758.1 |
| 23s rrna methyltransferase attenuator leader peptide erml | DWW32_09405 | Not Available | Negative | 1828562 - 1828645 | 3143.77 |
| peptide-binding protein | DWW32_09410 | Not Available | Negative | 1828666 - 1828935 | 9990.65 |
| topoisomerase | DWW32_09415 | Not Available | Negative | 1829069 - 1829353 | 10946.4 |
| hypothetical protein | DWW32_09420 | Not Available | Positive | 1829328 - 1829753 | 16603.0 |
| hypothetical protein | DWW32_09425 | Not Available | Positive | 1829785 - 1830009 | 8288.03 |
| sigma-70 family rna polymerase sigma factor | DWW32_09430 | Not Available | Positive | 1830289 - 1830717 | 16976.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
