Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Holdemanella biformis strain AF15-20
Accession NumberQRYQ00000000.1
Gene Summary
Adenine Count
860672 bp
Thymine Count
854649 bp
Guanine Count
446221 bp
Cytosine Count
438063 bp
Genome Length
2601418 bp
Protein-coding Genes
2503 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| shikimate dehydrogenase | DWW32_00780 | Not Available | - | 128719 - 130002 | 47732.7 |
| duf3784 domain-containing protein | DWW32_00785 | Not Available | + | 130271 - 130600 | 12565.7 |
| hypothetical protein | DWW32_00790 | Not Available | + | 130707 - 130970 | 10197.9 |
| lysr family transcriptional regulator | DWW32_00795 | Not Available | - | 131325 - 132212 | 34261.2 |
| fad-dependent oxidoreductase | DWW32_00800 | Not Available | + | 132350 - 134347 | 73460.5 |
| shikimate dehydrogenase | DWW32_00805 | Not Available | + | 134371 - 135243 | 31712.3 |
| mfs transporter | DWW32_00810 | Not Available | + | 135273 - 136478 | 42534.1 |
| trap transporter small permease | DWW32_00815 | Not Available | + | 136547 - 137071 | 20515.9 |
| trap transporter large permease | DWW32_00820 | Not Available | + | 137071 - 138363 | 45934.7 |
| c4-dicarboxylate abc transporter | DWW32_00825 | Not Available | + | 138373 - 139392 | 38640.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.