Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF15-20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
860672 bp
Thymine Count
854649 bp
Guanine Count
446221 bp
Cytosine Count
438063 bp
Genome Length
2601418 bp
Protein-coding Genes
2503 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DWW32_08810 | Not Available | Positive | 1704198 - 1705181 | 36327.4 |
| abc transporter permease | DWW32_08815 | Not Available | Positive | 1705195 - 1706106 | 33138.4 |
| abc transporter atp-binding protein | DWW32_08820 | Not Available | Positive | 1706122 - 1707141 | 37463.3 |
| abc transporter atp-binding protein | DWW32_08825 | Not Available | Positive | 1707144 - 1708127 | 37202.2 |
| hypothetical protein | DWW32_08830 | Not Available | Positive | 1708127 - 1708318 | 7121.97 |
| m3 family oligoendopeptidase | DWW32_08835 | Not Available | Positive | 1708361 - 1710055 | 67017.1 |
| 50s ribosomal protein l31 | DWW32_08840 | Not Available | Positive | 1710150 - 1710359 | 7784.35 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DWW32_08845 | Not Available | Positive | 1710586 - 1711752 | 43588.5 |
| dna/rna helicase | DWW32_08850 | Not Available | Positive | 1711790 - 1712956 | 44112.9 |
| comf family protein | DWW32_08855 | Not Available | Positive | 1712863 - 1713567 | 27853.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
