Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF15-20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
860672 bp
Thymine Count
854649 bp
Guanine Count
446221 bp
Cytosine Count
438063 bp
Genome Length
2601418 bp
Protein-coding Genes
2503 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | DWW32_07740 | Not Available | Negative | 1505864 - 1507789 | 75148.2 |
| cytidine deaminase | DWW32_07745 | Not Available | Negative | 1507855 - 1508337 | 18096.7 |
| rlua family pseudouridine synthase | DWW32_07750 | Not Available | Negative | 1508334 - 1509248 | 34545.5 |
| signal peptidase ii | DWW32_07755 | Not Available | Negative | 1509230 - 1509793 | 21602.6 |
| aarf/abc1/ubib kinase family protein | DWW32_07760 | Not Available | Negative | 1509738 - 1511333 | 60712.7 |
| tnpv protein | DWW32_07765 | Not Available | Positive | 1511653 - 1511808 | 6098.1 |
| hypothetical protein | DWW32_07770 | Not Available | Positive | 1511864 - 1512265 | 15342.2 |
| hypothetical protein | DWW32_07775 | Not Available | Positive | 1512431 - 1512961 | 20662.4 |
| hypothetical protein | DWW32_07780 | Not Available | Positive | 1513017 - 1514159 | 44912.5 |
| hypothetical protein | DWW32_07785 | Not Available | Positive | 1514165 - 1514731 | 22063.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
