Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF15-20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
860672 bp
Thymine Count
854649 bp
Guanine Count
446221 bp
Cytosine Count
438063 bp
Genome Length
2601418 bp
Protein-coding Genes
2503 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 1494947 - 1495033 | Not Available |
| rpn family recombination-promoting nuclease/putative transposase | DWW32_07695 | Not Available | Negative | 1495132 - 1496034 | 35275.3 |
| duf4065 domain-containing protein | DWW32_07700 | Not Available | Negative | 1496359 - 1497360 | 38562.8 |
| penicillin-binding protein | DWW32_07705 | Not Available | Negative | 1497880 - 1498581 | 26468.5 |
| udp-n-acetylglucosamine pyrophosphorylase | DWW32_07710 | Not Available | Negative | 1498634 - 1499308 | 24829.7 |
| metallophosphoesterase | DWW32_07715 | Not Available | Negative | 1499324 - 1499791 | 17855.1 |
| d-alanyl-d-alanine carboxypeptidase | DWW32_07720 | Not Available | Negative | 1499801 - 1500760 | 37368.4 |
| excinuclease abc subunit uvrc | DWW32_07725 | Not Available | Negative | 1500877 - 1502634 | 68173.7 |
| endonuclease muts2 | DWW32_07730 | Not Available | Negative | 1502643 - 1504967 | 87152.3 |
| ribonuclease hiii | DWW32_07735 | Not Available | Positive | 1505019 - 1505867 | 32042.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
