Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF15-20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
860672 bp
Thymine Count
854649 bp
Guanine Count
446221 bp
Cytosine Count
438063 bp
Genome Length
2601418 bp
Protein-coding Genes
2503 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroorotate dehydrogenase | DWW32_07440 | Not Available | Positive | 1449419 - 1450327 | 32110.2 |
| orotidine-5'-phosphate decarboxylase | DWW32_07445 | Not Available | Positive | 1450327 - 1451025 | 24998.3 |
| carbamoyl-phosphate synthase small subunit | DWW32_07450 | Not Available | Positive | 1451288 - 1452367 | 39899.9 |
| carbamoyl-phosphate synthase large subunit | DWW32_07455 | Not Available | Positive | 1452360 - 1455569 | 118839.0 |
| hsp20/alpha crystallin family protein | DWW32_07460 | Not Available | Positive | 1455733 - 1456128 | 15032.6 |
| hsp20/alpha crystallin family protein | DWW32_07465 | Not Available | Positive | 1456149 - 1456544 | 15017.7 |
| hypothetical protein | DWW32_07470 | Not Available | Positive | 1456563 - 1457342 | 31049.0 |
| duf4299 family protein | DWW32_07475 | Not Available | Positive | 1457396 - 1458223 | 32418.2 |
| alanyl-trna editing protein | DWW32_07480 | Not Available | Negative | 1458228 - 1459322 | 42188.2 |
| vut family protein | DWW32_07485 | Not Available | Positive | 1459456 - 1460199 | 27333.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
