Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF15-20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
860672 bp
Thymine Count
854649 bp
Guanine Count
446221 bp
Cytosine Count
438063 bp
Genome Length
2601418 bp
Protein-coding Genes
2503 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| triose-phosphate isomerase | DWW32_07275 | Not Available | Positive | 1415557 - 1416303 | 26941.2 |
| hypothetical protein | DWW32_07280 | Not Available | Positive | 1416438 - 1417460 | 36044.9 |
| diguanylate cyclase | DWW32_07285 | Not Available | Positive | 1417548 - 1418063 | 19320.1 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | DWW32_07290 | Not Available | Positive | 1418056 - 1418541 | 17545.5 |
| d-tyrosyl-trna(tyr) deacylase | DWW32_07295 | Not Available | Positive | 1418538 - 1418987 | 16791.2 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | DWW32_07300 | Not Available | Positive | 1418987 - 1419841 | 30610.5 |
| duf951 domain-containing protein | DWW32_07305 | Not Available | Positive | 1419844 - 1420035 | 7441.31 |
| redox-regulated atpase ychf | DWW32_07310 | Not Available | Positive | 1420053 - 1421156 | 41147.9 |
| site-2 protease family protein | DWW32_07315 | Not Available | Positive | 1421149 - 1421790 | 24130.2 |
| na/pi cotransporter family protein | DWW32_07320 | Not Available | Positive | 1421961 - 1423769 | 66156.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
