Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF15-20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
860672 bp
Thymine Count
854649 bp
Guanine Count
446221 bp
Cytosine Count
438063 bp
Genome Length
2601418 bp
Protein-coding Genes
2503 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crispr-associated endonuclease cas2 | DWW32_07225 | Not Available | Positive | 1404598 - 1404921 | 12652.8 |
| hypothetical protein | DWW32_07230 | Not Available | Positive | 1404966 - 1405790 | 32674.2 |
| hypothetical protein | DWW32_07235 | Not Available | Negative | 1407494 - 1407952 | 17543.0 |
| dna-binding response regulator | DWW32_07240 | Not Available | Positive | 1408485 - 1409153 | 25724.2 |
| sensor histidine kinase | DWW32_07245 | Not Available | Positive | 1409150 - 1410139 | 38541.3 |
| abc transporter atp-binding protein | DWW32_07250 | Not Available | Positive | 1410231 - 1410998 | 28508.5 |
| abc transporter permease | DWW32_07255 | Not Available | Positive | 1410991 - 1412958 | 75250.5 |
| abc transporter atp-binding protein | DWW32_07260 | Not Available | Positive | 1413066 - 1413776 | 27347.1 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | DWW32_07265 | Not Available | Positive | 1413773 - 1414246 | 18295.4 |
| phosphoglycerate kinase | DWW32_07270 | Not Available | Positive | 1414354 - 1415538 | 42028.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
