Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF15-20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
860672 bp
Thymine Count
854649 bp
Guanine Count
446221 bp
Cytosine Count
438063 bp
Genome Length
2601418 bp
Protein-coding Genes
2503 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| accessory sec system protein asp2 | DWW32_06900 | Not Available | Positive | 1339925 - 1341436 | 57992.6 |
| accessory sec system protein asp3 | DWW32_06905 | Not Available | Positive | 1341426 - 1341857 | 17067.3 |
| accessory sec system translocase seca2 | DWW32_06910 | Not Available | Positive | 1341859 - 1344168 | 88374.5 |
| accessory sec system glycosyltransferase gtfa | DWW32_06915 | Not Available | Positive | 1344187 - 1345668 | 57163.6 |
| accessory sec system glycosylation chaperone gtfb | DWW32_06920 | Not Available | Positive | 1345662 - 1346972 | 51043.2 |
| hypothetical protein | DWW32_06925 | Not Available | Positive | 1347345 - 1348043 | 25909.4 |
| hypothetical protein | DWW32_06930 | Not Available | Negative | 1348127 - 1348945 | 30565.0 |
| lema family protein | DWW32_06935 | Not Available | Positive | 1349016 - 1349561 | 20724.2 |
| duf2207 domain-containing protein | DWW32_06940 | Not Available | Positive | 1349524 - 1351416 | 71402.0 |
| type iii toxin-antitoxin system toxn/abiq family toxin | DWW32_06945 | Not Available | Positive | 1351928 - 1352350 | 16727.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
