Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF15-20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
860672 bp
Thymine Count
854649 bp
Guanine Count
446221 bp
Cytosine Count
438063 bp
Genome Length
2601418 bp
Protein-coding Genes
2503 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phoh family protein | DWW32_06695 | Not Available | Negative | 1292275 - 1293261 | 37315.8 |
| 30s ribosomal protein s21 | DWW32_06700 | Not Available | Negative | 1293274 - 1293453 | 6896.5 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | DWW32_06705 | Not Available | Negative | 1293533 - 1294975 | 53355.8 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | DWW32_06710 | Not Available | Negative | 1294978 - 1296276 | 49700.4 |
| rsme family rna methyltransferase | DWW32_06715 | Not Available | Negative | 1296263 - 1296982 | 27123.8 |
| rrna pseudouridine synthase | DWW32_06720 | Not Available | Negative | 1296982 - 1297710 | 27953.2 |
| smc-scp complex subunit scpb | DWW32_06725 | Not Available | Negative | 1297714 - 1298286 | 21797.4 |
| chromosome segregation protein scpa | DWW32_06730 | Not Available | Negative | 1298262 - 1298993 | 28796.0 |
| atp-binding protein | DWW32_06735 | Not Available | Negative | 1299389 - 1300804 | 54503.4 |
| response regulator | DWW32_06740 | Not Available | Positive | 1301288 - 1303708 | 92981.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
