Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF15-20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
860672 bp
Thymine Count
854649 bp
Guanine Count
446221 bp
Cytosine Count
438063 bp
Genome Length
2601418 bp
Protein-coding Genes
2503 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription antitermination factor nusb | DWW32_06645 | Not Available | Negative | 1282107 - 1282484 | 14446.4 |
| 5'-nucleotidase | DWW32_06650 | Not Available | Negative | 1282485 - 1283381 | 33338.7 |
| asp23/gls24 family envelope stress response protein | DWW32_06655 | Not Available | Negative | 1283417 - 1283746 | 12197.6 |
| riboflavin biosynthesis protein ribf | DWW32_06660 | Not Available | Negative | 1283776 - 1284768 | 37572.4 |
| trna pseudouridine(55) synthase trub | DWW32_06665 | Not Available | Negative | 1284762 - 1285586 | 31446.7 |
| hydrolase | DWW32_06670 | Not Available | Positive | 1285866 - 1286447 | 22314.5 |
| hypothetical protein | DWW32_06675 | Not Available | Negative | 1286501 - 1288144 | 64469.7 |
| aspartate--trna ligase | DWW32_06680 | Not Available | Negative | 1288204 - 1289940 | 66008.1 |
| histidine--trna ligase | DWW32_06685 | Not Available | Negative | 1289943 - 1291253 | 50054.6 |
| yebc/pmpr family dna-binding regulatory protein | DWW32_06690 | Not Available | Negative | 1291481 - 1292215 | 26996.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
