Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF15-20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
860672 bp
Thymine Count
854649 bp
Guanine Count
446221 bp
Cytosine Count
438063 bp
Genome Length
2601418 bp
Protein-coding Genes
2503 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2232 domain-containing protein | DWW32_06170 | Not Available | Negative | 1193100 - 1193954 | 32380.4 |
| 30s ribosomal protein s18 | DWW32_06175 | Not Available | Negative | 1194004 - 1194234 | 9022.46 |
| single-stranded dna-binding protein | DWW32_06180 | Not Available | Negative | 1194252 - 1194770 | 19026.9 |
| 30s ribosomal protein s6 | DWW32_06185 | Not Available | Negative | 1194787 - 1195080 | 11056.2 |
| nudix domain-containing protein | DWW32_06190 | Not Available | Negative | 1195188 - 1196411 | 47131.5 |
| 2-hydroxyglutaryl-coa dehydratase | DWW32_06195 | Not Available | Negative | 1196408 - 1197631 | 45936.0 |
| 2-hydroxyglutaryl-coa dehydratase | DWW32_06200 | Not Available | Negative | 1197667 - 1200597 | 109323.0 |
| mfs transporter | DWW32_06205 | Not Available | Positive | 1200798 - 1202033 | 45618.9 |
| xre family transcriptional regulator | DWW32_06210 | Not Available | Negative | 1202064 - 1203023 | 35601.9 |
| response regulator | DWW32_06215 | Not Available | Negative | 1203148 - 1206222 | 118364.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
