Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF15-20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
860672 bp
Thymine Count
854649 bp
Guanine Count
446221 bp
Cytosine Count
438063 bp
Genome Length
2601418 bp
Protein-coding Genes
2503 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-glu | Not Available | Not Available | Positive | 1104812 - 1104887 | Not Available |
| mate family efflux transporter | DWW32_05675 | Not Available | Negative | 1104959 - 1106359 | 51306.6 |
| rok family protein | DWW32_05680 | Not Available | Negative | 1106360 - 1107199 | 30782.0 |
| gntr family transcriptional regulator | DWW32_05685 | Not Available | Negative | 1107196 - 1107918 | 28025.9 |
| phosphoesterase | DWW32_05690 | Not Available | Negative | 1107951 - 1108571 | 24870.2 |
| duf1307 domain-containing protein | DWW32_05695 | Not Available | Negative | 1108615 - 1109127 | 19117.0 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DWW32_05700 | Not Available | Negative | 1109157 - 1110248 | 41251.6 |
| amino acid abc transporter permease | DWW32_05710 | Not Available | Negative | 1110969 - 1111652 | 24606.1 |
| amino acid abc transporter substrate-binding protein | DWW32_05715 | Not Available | Negative | 1111673 - 1112434 | 27697.1 |
| hpt domain-containing protein | DWW32_05720 | Not Available | Negative | 1113007 - 1113357 | 13303.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
