Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | strain AF15-20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
860672 bp
Thymine Count
854649 bp
Guanine Count
446221 bp
Cytosine Count
438063 bp
Genome Length
2601418 bp
Protein-coding Genes
2503 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii-a crispr-associated ramp protein csm3 | DWW32_04995 | Not Available | Negative | 954568 - 955230 | 24264.9 |
| type iii-a crispr-associated protein csm2 | DWW32_05000 | Not Available | Negative | 955243 - 955782 | 20894.0 |
| type iii-a crispr-associated protein cas10/csm1 | DWW32_05005 | Not Available | Negative | 955798 - 958050 | 86396.2 |
| hypothetical protein | DWW32_05010 | Not Available | Negative | 958129 - 958488 | 13939.6 |
| hypothetical protein | DWW32_05015 | Not Available | Negative | 959044 - 959439 | 15172.8 |
| hypothetical protein | DWW32_05020 | Not Available | Negative | 960130 - 963219 | 113958.0 |
| hypothetical protein | DWW32_05025 | Not Available | Negative | 963383 - 966472 | 114028.0 |
| hypothetical protein | DWW32_05030 | Not Available | Negative | 966504 - 966776 | 10437.2 |
| hypothetical protein | DWW32_05035 | Not Available | Negative | 967363 - 968121 | 28960.2 |
| bifunctional metallophosphatase/5'-nucleotidase | DWW32_05040 | Not Available | Negative | 968151 - 970067 | 71207.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
