Bacteroides stercoris strain AF16-30

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides stercoris strain AF16-30 is a Gram-negative, anaerobic bacterium characterized by its rod shape and the presence of flagella. This strain is part of the gut microbiota of Homo sapiens, primarily found in feces. As an anaerobic organism, Bacteroides stercoris AF16-30 thrives in oxygen-deprived environments, which is typical for many members of the gut microbiome. Its adaptation to such habitats plays a crucial role in its survival and functionality within the digestive system. The single replicon structure of its genome suggests a streamlined genetic organization that may facilitate efficient replication and adaptation to the gut environment. The presence of flagella in this strain indicates potential motility, which could be advantageous for colonization and interaction with the host's gut lining. Such motility may contribute to its ecological role, allowing it to navigate the complex microbial community and perform essential functions such as the fermentation of dietary fibers. Understanding the traits of Bacteroides stercoris strain AF16-30 provides insight into its ecological role within the human gut microbiota. As a member of this complex community, it may contribute to the maintenance of gut health and the metabolic processes that support host well-being. The balance of microbial populations, including Bacteroides stercoris, underscores the importance of gut microbiota in human health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides stercoris
Strainstrain AF16-30

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bacteroides stercoris strain AF16-30
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatfeces; gut; gut microbiota
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides stercoris strain AF16-30 AF16-30.Scaf81, whole genome

Gene Summary

Adenine Count

1099974 bp

Thymine Count

1057273 bp

Guanine Count

901526 bp

Cytosine Count

938431 bp

Genome Length

3997770 bp

Protein-coding Genes

3237 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
patatinDWW64_14635Not AvailablePositive3468351 - 347064887936.6
Trna-argNot AvailableNot AvailablePositive3470725 - 3470801Not Available
Trna-argNot AvailableNot AvailablePositive3470817 - 3470890Not Available
hypothetical proteinDWW64_14650Not AvailableNegative3471057 - 347139512508.6
septum formation initiator family proteinDWW64_14655Not AvailableNegative3471392 - 347170012416.0
dna polymerase iii subunit gamma/tauDWW64_14660Not AvailablePositive3471841 - 347366467592.2
sensor histidine kinaseDWW64_14670Not AvailablePositive3475685 - 347677642218.2
4fe-4s dicluster domain-containing proteinDWW64_14675Not AvailablePositive3476915 - 34770855774.66
pyridoxal phosphate-dependent aminotransferaseDWW64_14680Not AvailableNegative3477341 - 347853442990.6
bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase iiDWW64_14685Not AvailableNegative3478616 - 347983044979.3

Displaying genes 2841 – 2850 of 3294 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Enteric malnutritionCausesPMC8542975

Displaying health effects 1 – 1 of 1 in total