Bacteroides stercoris strain AF16-30

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides stercoris strain AF16-30 is a Gram-negative, anaerobic bacterium characterized by its rod shape and the presence of flagella. This strain is part of the gut microbiota of Homo sapiens, primarily found in feces. As an anaerobic organism, Bacteroides stercoris AF16-30 thrives in oxygen-deprived environments, which is typical for many members of the gut microbiome. Its adaptation to such habitats plays a crucial role in its survival and functionality within the digestive system. The single replicon structure of its genome suggests a streamlined genetic organization that may facilitate efficient replication and adaptation to the gut environment. The presence of flagella in this strain indicates potential motility, which could be advantageous for colonization and interaction with the host's gut lining. Such motility may contribute to its ecological role, allowing it to navigate the complex microbial community and perform essential functions such as the fermentation of dietary fibers. Understanding the traits of Bacteroides stercoris strain AF16-30 provides insight into its ecological role within the human gut microbiota. As a member of this complex community, it may contribute to the maintenance of gut health and the metabolic processes that support host well-being. The balance of microbial populations, including Bacteroides stercoris, underscores the importance of gut microbiota in human health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides stercoris
Strainstrain AF16-30

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bacteroides stercoris strain AF16-30
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatfeces; gut; gut microbiota
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides stercoris strain AF16-30 AF16-30.Scaf81, whole genome

Gene Summary

Adenine Count

1099974 bp

Thymine Count

1057273 bp

Guanine Count

901526 bp

Cytosine Count

938431 bp

Genome Length

3997770 bp

Protein-coding Genes

3237 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nadh-quinone oxidoreductase subunit jDWW64_13095Not AvailableNegative3108384 - 310889618604.5
4fe-4s dicluster domain-containing proteinDWW64_13100Not AvailableNegative3108926 - 310943519152.0
nadh-quinone oxidoreductase subunit nuohDWW64_13105Not AvailableNegative3109495 - 311057140176.6
nadh-quinone oxidoreductase subunit dDWW64_13110Not AvailableNegative3110651 - 311224360322.2
nadh-quinone oxidoreductase subunit bDWW64_13115Not AvailableNegative3112258 - 311284521762.5
nadh-quinone oxidoreductase subunit aDWW64_13120Not AvailableNegative3112836 - 311318613132.6
hypothetical proteinDWW64_13125Not AvailableNegative3113285 - 311363212770.6
trkh family potassium uptake proteinDWW64_13130Not AvailableNegative3113758 - 311520953148.1
trk system potassium transporter trkaDWW64_13135Not AvailableNegative3115298 - 311663849264.4
1-deoxy-d-xylulose-5-phosphate synthaseDWW64_13140Not AvailableNegative3116717 - 311862470520.0

Displaying genes 2551 – 2560 of 3294 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Enteric malnutritionCausesPMC8542975

Displaying health effects 1 – 1 of 1 in total