Bacteroides stercoris strain AF16-30

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides stercoris strain AF16-30 is a Gram-negative, anaerobic bacterium characterized by its rod shape and the presence of flagella. This strain is part of the gut microbiota of Homo sapiens, primarily found in feces. As an anaerobic organism, Bacteroides stercoris AF16-30 thrives in oxygen-deprived environments, which is typical for many members of the gut microbiome. Its adaptation to such habitats plays a crucial role in its survival and functionality within the digestive system. The single replicon structure of its genome suggests a streamlined genetic organization that may facilitate efficient replication and adaptation to the gut environment. The presence of flagella in this strain indicates potential motility, which could be advantageous for colonization and interaction with the host's gut lining. Such motility may contribute to its ecological role, allowing it to navigate the complex microbial community and perform essential functions such as the fermentation of dietary fibers. Understanding the traits of Bacteroides stercoris strain AF16-30 provides insight into its ecological role within the human gut microbiota. As a member of this complex community, it may contribute to the maintenance of gut health and the metabolic processes that support host well-being. The balance of microbial populations, including Bacteroides stercoris, underscores the importance of gut microbiota in human health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides stercoris
Strainstrain AF16-30

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bacteroides stercoris strain AF16-30
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatfeces; gut; gut microbiota
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides stercoris strain AF16-30 AF16-30.Scaf81, whole genome

Gene Summary

Adenine Count

1099974 bp

Thymine Count

1057273 bp

Guanine Count

901526 bp

Cytosine Count

938431 bp

Genome Length

3997770 bp

Protein-coding Genes

3237 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
susc/raga family tonb-linked outer membrane proteinDWW64_08225Not AvailableNegative2036861 - 2040331128142.0
fecr family proteinDWW64_08230Not AvailableNegative2040499 - 204150638749.7
rna polymerase sigma-70 factorDWW64_08235Not AvailableNegative2041573 - 204218124143.2
proline--trna ligaseDWW64_08240Not AvailableNegative2042441 - 204393456743.9
nucleotidyltransferase domain-containing proteinDWW64_08245Not AvailableNegative2044483 - 204477911436.9
hepn domain-containing proteinDWW64_08250Not AvailableNegative2044758 - 204514415145.4
Trna-glyNot AvailableNot AvailablePositive2045494 - 2045569Not Available
bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferaseDWW64_08260Not AvailablePositive2045719 - 204623419502.2
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferaseDWW64_08265Not AvailablePositive2046272 - 204730937724.0
adenosylcobinamide-gdp ribazoletransferaseDWW64_08270Not AvailablePositive2047414 - 204821730183.0

Displaying genes 1611 – 1620 of 3294 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Enteric malnutritionCausesPMC8542975

Displaying health effects 1 – 1 of 1 in total