Bacteroides stercoris strain AF16-30

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides stercoris strain AF16-30 is a Gram-negative, anaerobic bacterium characterized by its rod shape and the presence of flagella. This strain is part of the gut microbiota of Homo sapiens, primarily found in feces. As an anaerobic organism, Bacteroides stercoris AF16-30 thrives in oxygen-deprived environments, which is typical for many members of the gut microbiome. Its adaptation to such habitats plays a crucial role in its survival and functionality within the digestive system. The single replicon structure of its genome suggests a streamlined genetic organization that may facilitate efficient replication and adaptation to the gut environment. The presence of flagella in this strain indicates potential motility, which could be advantageous for colonization and interaction with the host's gut lining. Such motility may contribute to its ecological role, allowing it to navigate the complex microbial community and perform essential functions such as the fermentation of dietary fibers. Understanding the traits of Bacteroides stercoris strain AF16-30 provides insight into its ecological role within the human gut microbiota. As a member of this complex community, it may contribute to the maintenance of gut health and the metabolic processes that support host well-being. The balance of microbial populations, including Bacteroides stercoris, underscores the importance of gut microbiota in human health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides stercoris
Strainstrain AF16-30

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bacteroides stercoris strain AF16-30
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatfeces; gut; gut microbiota
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides stercoris strain AF16-30 AF16-30.Scaf81, whole genome

Gene Summary

Adenine Count

1099974 bp

Thymine Count

1057273 bp

Guanine Count

901526 bp

Cytosine Count

938431 bp

Genome Length

3997770 bp

Protein-coding Genes

3237 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter permeaseDWW64_08120Not AvailableNegative2011357 - 201262547688.7
abc transporter permeaseDWW64_08125Not AvailableNegative2012629 - 201390947339.7
abc transporter permeaseDWW64_08130Not AvailableNegative2013938 - 201517647990.8
abc transporter permeaseDWW64_08135Not AvailableNegative2015210 - 201650247659.8
duf2807 domain-containing proteinDWW64_08140Not AvailableNegative2016504 - 201712722095.5
hypothetical proteinDWW64_08145Not AvailableNegative2017157 - 201843448472.1
hypothetical proteinDWW64_08150Not AvailableNegative2018448 - 201972246822.3
abc transporter atp-binding proteinDWW64_08155Not AvailableNegative2019760 - 202042524629.0
hlyd family efflux transporter periplasmic adaptor subunitDWW64_08160Not AvailableNegative2020445 - 202169246588.9
hypothetical proteinDWW64_08165Not AvailablePositive2021988 - 20221706968.59

Displaying genes 1591 – 1600 of 3294 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Enteric malnutritionCausesPMC8542975

Displaying health effects 1 – 1 of 1 in total