Bacteroides uniformis strain AF17-20

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides uniformis strain AF17-20 is a Gram-negative, anaerobic bacterium predominantly found in the gastrointestinal tract of Homo sapiens. This rod-shaped organism possesses flagella, which may contribute to its motility within the gut luminal niche. It has a single replicon, indicating a streamlined genomic organization that is characteristic of many bacteria within the Bacteroides genus. One of the notable health effects associated with Bacteroides uniformis strain AF17-20 is its involvement in intestinal inflammation. This association highlights the strain's potential role in gut health and disease, suggesting that while it is a part of the normal microbiota, it may also be implicated in pathological conditions under certain circumstances. The ecological role of Bacteroides uniformis strain AF17-20 within the human gut is likely multifaceted, contributing to the complex interplay of microbial communities that influence host health. Understanding the behaviors and interactions of this strain can offer insights into its function within the gut ecosystem, particularly in the context of maintaining intestinal homeostasis or contributing to inflammatory processes. Further investigation into its mechanisms of action could provide valuable information for therapeutic strategies targeting gut-related health issues.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides uniformis
Strainstrain AF17-20

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bacteroides uniformis strain AF17-20
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgastrointestinal tract; gut; gut luminal niche; intestinal tract
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides uniformis strain AF17-20 AF17-20.Scaf63, whole genome

Gene Summary

Adenine Count

1348378 bp

Thymine Count

1303029 bp

Guanine Count

1123517 bp

Cytosine Count

1182346 bp

Genome Length

4957414 bp

Protein-coding Genes

4125 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii 3-dehydroquinate dehydrataseDWW83_05100Not AvailableNegative1223090 - 122350915493.7
site-specific tyrosine recombinase xerdDWW83_05105Not AvailablePositive1223628 - 122458136525.1
tetratricopeptide repeat proteinDWW83_05110Not AvailablePositive1224718 - 122641262081.0
ahpc/tsa family proteinDWW83_05115Not AvailablePositive1226524 - 122759740865.9
atp-binding proteinDWW83_05120Not AvailablePositive1227635 - 122917356038.8
carbohydrate-binding proteinDWW83_05125Not AvailableNegative1229300 - 1232002101979.0
duf2961 domain-containing proteinDWW83_05130Not AvailableNegative1232038 - 123322844913.8
glycoside hydrolase family 92 proteinDWW83_05135Not AvailableNegative1233271 - 123564690824.1
ragb/susd family nutrient uptake outer membrane proteinDWW83_05140Not AvailableNegative1235723 - 123751368498.7
tonb-dependent receptorDWW83_05145Not AvailableNegative1237542 - 1240523110446.0

Displaying genes 1011 – 1020 of 4190 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Intestinal inflammationCausesPMC10936605

Displaying health effects 1 – 1 of 1 in total