[Clostridium] leptum strain AF17-9

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Description

Clostridium leptum strain AF17-9 is a bacterium primarily found in the feces, gut, and rectal mucosa of its host, Homo sapiens. This strain is significant within the context of the human microbiome, contributing to the complex ecosystem of microorganisms that reside within the intestinal tract. C. leptum is characterized by having a single replicon, which indicates a streamlined genomic structure that may be associated with its adaptation to the specific environments within the human body. The reference accession number for this strain is QRXM00000000.1, which allows for further investigation and analysis of its genetic makeup. The presence of C. leptum in the gut microbiota suggests a role in the fermentation of dietary fibers and the production of short-chain fatty acids, which are important for gut health and metabolic processes. This bacterium may contribute to maintaining gut homeostasis and has potential implications in understanding human health and disease. The ecological niche it occupies highlights the importance of microbial diversity in the gastrointestinal tract and its potential influences on host physiology and immune responses. Overall, the study of C. leptum strain AF17-9 can provide insights into the functional roles of gut microbiota in humans.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatfeces; gut; rectal mucosa
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

[Clostridium] leptum strain AF17-9 AF17-9.Scaf48, whole genome

Gene Summary

Adenine Count

787559 bp

Thymine Count

777179 bp

Guanine Count

805430 bp

Cytosine Count

769801 bp

Genome Length

3140226 bp

Protein-coding Genes

2827 genes

Non-Coding Genes

94 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tetr/acrr family transcriptional regulatorDWW99_13860Not AvailableNegative2946579 - 294716922478.9
xre family transcriptional regulatorDWW99_13865Not AvailableNegative2947401 - 294776013692.6
dna-binding response regulatorDWW99_13870Not AvailablePositive2948276 - 294871016480.7
sigma-70 family rna polymerase sigma factorDWW99_13875Not AvailablePositive2949153 - 294957816840.2
atp-dependent dna helicaseDWW99_13880Not AvailablePositive2950128 - 295208374012.0
hypothetical proteinDWW99_13885Not AvailablePositive2952099 - 295253316647.2
hypothetical proteinDWW99_13890Not AvailablePositive2952540 - 29527196682.18
recombinase family proteinDWW99_13895Not AvailablePositive2952806 - 295434458772.6
hypothetical proteinDWW99_13900Not AvailablePositive2954347 - 295517731708.3
recombinase family proteinDWW99_13905Not AvailablePositive2955194 - 295680461594.4

Displaying genes 2771 – 2780 of 2921 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.