[Clostridium] leptum strain AF17-9

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Description

Clostridium leptum strain AF17-9 is a bacterium primarily found in the feces, gut, and rectal mucosa of its host, Homo sapiens. This strain is significant within the context of the human microbiome, contributing to the complex ecosystem of microorganisms that reside within the intestinal tract. C. leptum is characterized by having a single replicon, which indicates a streamlined genomic structure that may be associated with its adaptation to the specific environments within the human body. The reference accession number for this strain is QRXM00000000.1, which allows for further investigation and analysis of its genetic makeup. The presence of C. leptum in the gut microbiota suggests a role in the fermentation of dietary fibers and the production of short-chain fatty acids, which are important for gut health and metabolic processes. This bacterium may contribute to maintaining gut homeostasis and has potential implications in understanding human health and disease. The ecological niche it occupies highlights the importance of microbial diversity in the gastrointestinal tract and its potential influences on host physiology and immune responses. Overall, the study of C. leptum strain AF17-9 can provide insights into the functional roles of gut microbiota in humans.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatfeces; gut; rectal mucosa
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

[Clostridium] leptum strain AF17-9 AF17-9.Scaf48, whole genome

Gene Summary

Adenine Count

787559 bp

Thymine Count

777179 bp

Guanine Count

805430 bp

Cytosine Count

769801 bp

Genome Length

3140226 bp

Protein-coding Genes

2827 genes

Non-Coding Genes

94 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glucosylceramidaseDWW99_12385Not AvailableNegative2624118 - 262548551955.7
flavodoxinDWW99_12390Not AvailablePositive2625685 - 262617918642.4
aec family transporterDWW99_12395Not AvailableNegative2626347 - 262728533883.9
class i mannose-6-phosphate isomeraseDWW99_12400Not AvailablePositive2627498 - 262846035719.7
l-rhamnose isomeraseDWW99_12405Not AvailableNegative2629173 - 263042947116.0
diacylglycerol kinase family lipid kinaseDWW99_12410Not AvailablePositive2630707 - 263165735302.5
Trna-thrNot AvailableNot AvailablePositive2631754 - 2631829Not Available
Trna-tyrNot AvailableNot AvailablePositive2631858 - 2631942Not Available
mate family efflux transporterDWW99_12425Not AvailableNegative2632327 - 263365847861.0
merr family transcriptional regulatorDWW99_12430Not AvailablePositive2633745 - 263457531731.4

Displaying genes 2481 – 2490 of 2921 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.