[Clostridium] leptum strain AF17-9

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Description

Clostridium leptum strain AF17-9 is a bacterium primarily found in the feces, gut, and rectal mucosa of its host, Homo sapiens. This strain is significant within the context of the human microbiome, contributing to the complex ecosystem of microorganisms that reside within the intestinal tract. C. leptum is characterized by having a single replicon, which indicates a streamlined genomic structure that may be associated with its adaptation to the specific environments within the human body. The reference accession number for this strain is QRXM00000000.1, which allows for further investigation and analysis of its genetic makeup. The presence of C. leptum in the gut microbiota suggests a role in the fermentation of dietary fibers and the production of short-chain fatty acids, which are important for gut health and metabolic processes. This bacterium may contribute to maintaining gut homeostasis and has potential implications in understanding human health and disease. The ecological niche it occupies highlights the importance of microbial diversity in the gastrointestinal tract and its potential influences on host physiology and immune responses. Overall, the study of C. leptum strain AF17-9 can provide insights into the functional roles of gut microbiota in humans.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatfeces; gut; rectal mucosa
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

[Clostridium] leptum strain AF17-9 AF17-9.Scaf48, whole genome

Gene Summary

Adenine Count

787559 bp

Thymine Count

777179 bp

Guanine Count

805430 bp

Cytosine Count

769801 bp

Genome Length

3140226 bp

Protein-coding Genes

2827 genes

Non-Coding Genes

94 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pasta domain-containing proteinDWW99_00765Not AvailablePositive175196 - 17688761574.2
xre family transcriptional regulatorDWW99_00770Not AvailableNegative177097 - 17780725882.9
histidine phosphatase family proteinDWW99_00775Not AvailablePositive177957 - 17867026382.5
3-isopropylmalate dehydrogenaseDWW99_00780Not AvailablePositive178759 - 17982938425.5
pyruvate formate lyase-activating proteinDWW99_00785Not AvailableNegative179984 - 18072126810.2
formate c-acetyltransferaseDWW99_00790Not AvailableNegative180877 - 18309083906.4
cytidine deaminaseDWW99_00795Not AvailableNegative183116 - 18360418189.6
16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsmaDWW99_00800Not AvailablePositive183812 - 18469031995.9
hypothetical proteinDWW99_00805Not AvailablePositive184695 - 1849679679.68
dna-binding response regulatorDWW99_00810Not AvailablePositive185061 - 18576526599.4

Displaying genes 211 – 220 of 2921 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.