Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose 3,5-epimerase | DWX04_04690 | Not Available | Positive | 1142848 - 1143324 | 17747.7 |
| glucose-1-phosphate cytidylyltransferase | DWX04_04695 | Not Available | Positive | 1143321 - 1144121 | 30880.2 |
| degt/dnrj/eryc1/strs aminotransferase family protein | DWX04_04700 | Not Available | Positive | 1144124 - 1145245 | 41971.6 |
| glycosyltransferase | DWX04_04705 | Not Available | Positive | 1145242 - 1146189 | 37802.4 |
| hypothetical protein | DWX04_04710 | Not Available | Positive | 1146676 - 1147011 | 13409.5 |
| hypothetical protein | DWX04_04720 | Not Available | Positive | 1149166 - 1150383 | 46982.2 |
| glycosyltransferase | DWX04_04725 | Not Available | Positive | 1150486 - 1151568 | 40950.9 |
| glycosyltransferase family 4 protein | DWX04_04730 | Not Available | Positive | 1151565 - 1152680 | 42897.5 |
| nad(p)-dependent oxidoreductase | DWX04_04735 | Not Available | Positive | 1152687 - 1153703 | 37899.1 |
| hypothetical protein | DWX04_04740 | Not Available | Positive | 1153709 - 1154521 | 31104.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

