Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acylneuraminate cytidylyltransferase family protein | DWX04_04640 | Not Available | Positive | 1131095 - 1131790 | 25975.1 |
| nucleotidyltransferase | DWX04_04645 | Not Available | Positive | 1131796 - 1132836 | 39982.4 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | DWX04_04650 | Not Available | Positive | 1132856 - 1133608 | 28746.8 |
| 4-hydroxy-2-ketovalerate aldolase | DWX04_04655 | Not Available | Positive | 1133605 - 1135182 | 60315.2 |
| inositol monophosphatase | DWX04_04660 | Not Available | Positive | 1135175 - 1135867 | 26453.0 |
| hypothetical protein | DWX04_04665 | Not Available | Positive | 1136085 - 1137263 | 45422.1 |
| hypothetical protein | DWX04_04670 | Not Available | Positive | 1137244 - 1138887 | 63754.8 |
| lipopolysaccharide biosynthesis protein | DWX04_04675 | Not Available | Positive | 1138893 - 1140422 | 58485.2 |
| pyridoxal-5'-phosphate-dependent protein | DWX04_04680 | Not Available | Positive | 1140477 - 1141748 | 47979.9 |
| cdp-glucose 4,6-dehydratase | DWX04_04685 | Not Available | Positive | 1141738 - 1142838 | 41565.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

