Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | DWX04_04280 | Not Available | Negative | 1047178 - 1048113 | 36228.9 |
| ragb/susd family nutrient uptake outer membrane protein | DWX04_04290 | Not Available | Positive | 1052008 - 1053597 | 60845.8 |
| hypothetical protein | DWX04_04295 | Not Available | Positive | 1053610 - 1054854 | 47290.9 |
| had family hydrolase | DWX04_04300 | Not Available | Negative | 1054967 - 1055701 | 27125.4 |
| glucose-6-phosphate isomerase | DWX04_04305 | Not Available | Negative | 1055851 - 1057194 | 49150.9 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | DWX04_04310 | Not Available | Negative | 1057208 - 1058203 | 37117.2 |
| lysine--trna ligase | DWX04_04315 | Not Available | Negative | 1058260 - 1059990 | 66493.3 |
| hypothetical protein | DWX04_04320 | Not Available | Negative | 1060065 - 1060673 | 23069.1 |
| tlpa family protein disulfide reductase | DWX04_04325 | Not Available | Positive | 1060905 - 1061447 | 20320.1 |
| n-acetylmuramoyl-l-alanine amidase | DWX04_04330 | Not Available | Positive | 1061454 - 1062260 | 30760.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

