Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_04230 | Not Available | Positive | 1037185 - 1037415 | 9035.86 |
| hypothetical protein | DWX04_04235 | Not Available | Negative | 1037762 - 1037983 | 8908.84 |
| is982 family transposase is1187 | DWX04_04240 | Not Available | Negative | 1038174 - 1039154 | 37555.5 |
| class a extended-spectrum beta-lactamase cfxa3 | DWX04_04245 | Not Available | Positive | 1039273 - 1040238 | 35330.5 |
| mobilization protein | DWX04_04250 | Not Available | Negative | 1040331 - 1041734 | 54960.8 |
| hypothetical protein | DWX04_04255 | Not Available | Negative | 1042017 - 1043132 | 42693.9 |
| helicase | DWX04_04260 | Not Available | Negative | 1043136 - 1044233 | 40866.6 |
| helix-turn-helix domain-containing protein | DWX04_04265 | Not Available | Negative | 1044239 - 1044613 | 14142.9 |
| transposase | DWX04_04270 | Not Available | Negative | 1044813 - 1045670 | 33369.8 |
| site-specific integrase | DWX04_04275 | Not Available | Negative | 1045918 - 1047036 | 43474.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

