Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 2 protein | DWX04_04075 | Not Available | Positive | 994306 - 996873 | 98692.7 |
| beta-n-acetylhexosaminidase | DWX04_04080 | Not Available | Positive | 996890 - 999214 | 86312.9 |
| cyclically-permuted mutarotase family protein | DWX04_04085 | Not Available | Positive | 999401 - 1000528 | 40499.5 |
| beta-n-acetylhexosaminidase | DWX04_04090 | Not Available | Positive | 1000525 - 1002579 | 77101.7 |
| glycoside hydrolase family 92 protein | DWX04_04095 | Not Available | Positive | 1002606 - 1004858 | 85487.5 |
| duf4982 domain-containing protein | DWX04_04100 | Not Available | Positive | 1004861 - 1007365 | 94193.1 |
| n-acetylglucosamine-6-phosphate deacetylase | DWX04_04105 | Not Available | Positive | 1007541 - 1008704 | 42239.2 |
| dna-binding response regulator | DWX04_04110 | Not Available | Negative | 1008773 - 1009474 | 26867.4 |
| sensor histidine kinase | DWX04_04115 | Not Available | Negative | 1009497 - 1010930 | 55051.1 |
| glpgli family protein | DWX04_04120 | Not Available | Positive | 1011101 - 1011967 | 32761.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

