Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4143 domain-containing protein | DWX04_03975 | Not Available | Positive | 965445 - 966803 | 52873.9 |
| hypothetical protein | DWX04_03980 | Not Available | Negative | 967344 - 967547 | 7966.77 |
| cell surface protein | DWX04_03985 | Not Available | Positive | 968552 - 971386 | 98197.2 |
| pqqd family protein | DWX04_03990 | Not Available | Positive | 971499 - 971768 | 10032.2 |
| hypothetical protein | DWX04_03995 | Not Available | Positive | 971806 - 972891 | 41208.2 |
| abc transporter atp-binding protein | DWX04_04000 | Not Available | Positive | 972899 - 974551 | 61614.1 |
| hypothetical protein | DWX04_04005 | Not Available | Positive | 974535 - 975449 | 33810.4 |
| s26 family signal peptidase | DWX04_04010 | Not Available | Positive | 975418 - 975885 | 18041.4 |
| duf1343 domain-containing protein | DWX04_04015 | Not Available | Negative | 975913 - 977073 | 43609.9 |
| hdig domain-containing protein | DWX04_04020 | Not Available | Positive | 977127 - 977663 | 20325.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

