Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter | DWX04_03925 | Not Available | Positive | 956008 - 956967 | 35548.5 |
| pyridoxal phosphate-dependent aminotransferase | DWX04_03930 | Not Available | Negative | 957059 - 958222 | 44460.2 |
| duf3737 family protein | DWX04_03935 | Not Available | Negative | 958232 - 959098 | 33256.2 |
| alpha/beta hydrolase | DWX04_03940 | Not Available | Negative | 959214 - 960269 | 39301.2 |
| hypothetical protein | DWX04_03945 | Not Available | Positive | 960548 - 960727 | 6327.56 |
| sugar o-acetyltransferase | DWX04_03950 | Not Available | Negative | 960749 - 961324 | 20858.8 |
| hypothetical protein | DWX04_03955 | Not Available | Negative | 961339 - 961626 | 10639.0 |
| alpha/beta hydrolase | DWX04_03960 | Not Available | Negative | 961991 - 962860 | 32818.4 |
| hypothetical protein | DWX04_03965 | Not Available | Positive | 963126 - 964793 | 64852.1 |
| hypothetical protein | DWX04_03970 | Not Available | Negative | 964935 - 965192 | 10068.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

