Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | DWX04_03875 | Not Available | Positive | 941168 - 942484 | 49152.8 |
| glycosyltransferase family 2 protein | DWX04_03880 | Not Available | Positive | 942520 - 943545 | 39392.6 |
| radical sam protein | DWX04_03885 | Not Available | Positive | 943633 - 944514 | 33160.9 |
| dihydroneopterin aldolase | DWX04_03890 | Not Available | Negative | 944661 - 945029 | 13945.8 |
| hypothetical protein | DWX04_03895 | Not Available | Positive | 945191 - 948163 | 110652.0 |
| adenosylcobalamin-dependent ribonucleoside-diphosphate reductase | DWX04_03900 | Not Available | Negative | 948256 - 950802 | 96377.3 |
| nadph-dependent oxidoreductase | DWX04_03905 | Not Available | Positive | 951146 - 951886 | 28410.1 |
| chromosomal replication initiator protein dnaa | DWX04_03910 | Not Available | Negative | 951971 - 953377 | 53559.4 |
| mce family protein | DWX04_03915 | Not Available | Negative | 953715 - 954602 | 32671.6 |
| n-acetylmuramoyl-l-alanine amidase | DWX04_03920 | Not Available | Negative | 954622 - 955851 | 46283.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

