Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | DWX04_03720 | Not Available | Positive | 905674 - 906741 | 39173.2 |
| acrb/acrd/acrf family protein | DWX04_03725 | Not Available | Positive | 906746 - 909826 | 115310.0 |
| tolc family protein | DWX04_03730 | Not Available | Positive | 909813 - 911300 | 56959.7 |
| acrb/acrd/acrf family protein | DWX04_03735 | Not Available | Positive | 911297 - 914473 | 121026.0 |
| n-acetylglucosamine-6-phosphate deacetylase | DWX04_03740 | Not Available | Positive | 914564 - 915727 | 42218.9 |
| threonylcarbamoyl-amp synthase | DWX04_03745 | Not Available | Positive | 915894 - 916469 | 21163.3 |
| chloride channel protein | DWX04_03750 | Not Available | Positive | 916487 - 918280 | 66651.6 |
| methionyl-trna formyltransferase | DWX04_03755 | Not Available | Positive | 918294 - 919268 | 36638.5 |
| hypothetical protein | DWX04_03760 | Not Available | Negative | 919341 - 920123 | 29077.8 |
| sigma-70 family rna polymerase sigma factor | DWX04_03765 | Not Available | Positive | 920281 - 920823 | 20885.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

