Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_03670 | Not Available | Positive | 895187 - 895423 | 8161.72 |
| 6-bladed beta-propeller | DWX04_03675 | Not Available | Positive | 895529 - 896551 | 39137.4 |
| hypothetical protein | DWX04_03680 | Not Available | Positive | 896969 - 897211 | 8720.21 |
| 6-bladed beta-propeller | DWX04_03685 | Not Available | Positive | 897345 - 898391 | 39445.7 |
| hypothetical protein | DWX04_03690 | Not Available | Positive | 898420 - 898821 | 15588.7 |
| hypothetical protein | DWX04_03695 | Not Available | Positive | 898924 - 899208 | 10696.8 |
| hypothetical protein | DWX04_03700 | Not Available | Positive | 899230 - 901143 | 74983.5 |
| signal peptidase i | DWX04_03705 | Not Available | Positive | 901145 - 902047 | 34656.9 |
| hypothetical protein | DWX04_03710 | Not Available | Positive | 902062 - 903969 | 73697.2 |
| o-antigen ligase domain-containing protein | DWX04_03715 | Not Available | Positive | 903972 - 905621 | 62083.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

