Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lema family protein | DWX04_03620 | Not Available | Positive | 885288 - 885869 | 21751.9 |
| chorismate synthase | DWX04_03625 | Not Available | Positive | 886078 - 887154 | 39180.9 |
| dipeptidase | DWX04_03630 | Not Available | Positive | 887168 - 888520 | 49852.0 |
| nitroreductase family protein | DWX04_03635 | Not Available | Positive | 888533 - 889162 | 23181.1 |
| is982 family transposase | DWX04_03640 | Not Available | Positive | 889294 - 890199 | 35029.3 |
| dna-binding response regulator | DWX04_03645 | Not Available | Negative | 890738 - 891736 | 38295.5 |
| hypothetical protein | DWX04_03650 | Not Available | Positive | 891990 - 892211 | 7984.66 |
| duf1573 domain-containing protein | DWX04_03655 | Not Available | Positive | 892215 - 893081 | 33037.6 |
| hypothetical protein | DWX04_03660 | Not Available | Positive | 893323 - 893574 | 8835.47 |
| hypothetical protein | DWX04_03665 | Not Available | Positive | 893639 - 894688 | 40376.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

