Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii pantothenate kinase | DWX04_03470 | Not Available | Positive | 849662 - 850390 | 26911.9 |
| hypothetical protein | DWX04_03475 | Not Available | Positive | 850377 - 851693 | 49216.0 |
| tetratricopeptide repeat protein | DWX04_03480 | Not Available | Positive | 851740 - 853095 | 50268.8 |
| lps export abc transporter periplasmic protein lptc | DWX04_03485 | Not Available | Positive | 853098 - 853742 | 24876.2 |
| hlyc/corc family transporter | DWX04_03490 | Not Available | Positive | 853756 - 855015 | 47647.0 |
| peptidylprolyl isomerase | DWX04_03495 | Not Available | Positive | 855121 - 857253 | 78893.4 |
| energy transducer tonb | DWX04_03500 | Not Available | Negative | 857883 - 858968 | 41925.6 |
| ketol-acid reductoisomerase | DWX04_03505 | Not Available | Negative | 859096 - 860139 | 38168.5 |
| acyl-[acyl-carrier-protein] thioesterase | DWX04_03510 | Not Available | Negative | 860174 - 860917 | 28470.1 |
| acetolactate synthase small subunit | DWX04_03515 | Not Available | Negative | 860917 - 861471 | 21284.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

