Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | DWX04_03310 | Not Available | Positive | 816236 - 817510 | 47720.5 |
| hypothetical protein | DWX04_03320 | Not Available | Negative | 817814 - 818056 | 9153.66 |
| hypothetical protein | DWX04_03325 | Not Available | Negative | 818104 - 818310 | 8004.06 |
| duf4251 domain-containing protein | DWX04_03330 | Not Available | Positive | 818475 - 819029 | 20105.3 |
| duf4251 domain-containing protein | DWX04_03335 | Not Available | Positive | 819263 - 819820 | 20164.2 |
| duf4136 domain-containing protein | DWX04_03340 | Not Available | Positive | 819846 - 820478 | 24210.4 |
| porin family protein | DWX04_03345 | Not Available | Positive | 820491 - 821129 | 24647.5 |
| histidine kinase | DWX04_03350 | Not Available | Positive | 821246 - 822289 | 40320.4 |
| dna-binding response regulator | DWX04_03355 | Not Available | Positive | 822282 - 823067 | 30197.6 |
| atpase | DWX04_03360 | Not Available | Positive | 823223 - 824062 | 30757.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

