Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pirin family protein | DWX04_03210 | Not Available | Positive | 795695 - 796399 | 26574.4 |
| hypothetical protein | DWX04_03215 | Not Available | Negative | 796622 - 796915 | 11293.8 |
| exodeoxyribonuclease iii | DWX04_03220 | Not Available | Negative | 797072 - 797827 | 29696.0 |
| preprotein translocase subunit secg | DWX04_03225 | Not Available | Negative | 797990 - 798355 | 12571.2 |
| tetratricopeptide repeat protein | DWX04_03230 | Not Available | Negative | 798361 - 799113 | 29518.3 |
| hypothetical protein | DWX04_03235 | Not Available | Negative | 799130 - 799657 | 19738.6 |
| sigma-54-dependent fis family transcriptional regulator | DWX04_03240 | Not Available | Negative | 799644 - 800909 | 46861.1 |
| inositol-3-phosphate synthase | DWX04_03245 | Not Available | Negative | 801076 - 802383 | 48823.8 |
| ribokinase | DWX04_03250 | Not Available | Positive | 802519 - 803415 | 33171.6 |
| sugar mfs transporter | DWX04_03255 | Not Available | Negative | 803469 - 804668 | 44373.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

