Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_03110 | Not Available | Positive | 780741 - 780989 | 9849.11 |
| duf4199 domain-containing protein | DWX04_03115 | Not Available | Positive | 780996 - 781529 | 20508.6 |
| glycosyltransferase | DWX04_03120 | Not Available | Positive | 781533 - 782486 | 36346.1 |
| hypothetical protein | DWX04_03125 | Not Available | Positive | 782488 - 783036 | 20757.9 |
| hypothetical protein | DWX04_03130 | Not Available | Positive | 782984 - 783685 | 26539.9 |
| manganese efflux pump | DWX04_03135 | Not Available | Positive | 783689 - 784261 | 21225.7 |
| fad:protein fmn transferase | DWX04_03140 | Not Available | Positive | 784275 - 785291 | 37820.5 |
| marc family protein | DWX04_03145 | Not Available | Negative | 785451 - 786053 | 22154.0 |
| crp/fnr family transcriptional regulator | DWX04_03150 | Not Available | Positive | 786241 - 786918 | 26004.6 |
| m3 family peptidase | DWX04_03155 | Not Available | Positive | 787076 - 789118 | 77820.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

