Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-rhamnosidase | DWX04_03060 | Not Available | Negative | 764511 - 768485 | 149937.0 |
| duf4038 domain-containing protein | DWX04_03065 | Not Available | Negative | 768491 - 769960 | 56339.4 |
| glycoside hydrolase family 88 protein | DWX04_03070 | Not Available | Negative | 770111 - 771310 | 45347.0 |
| glycoside hydrolase family 95 protein | DWX04_03075 | Not Available | Negative | 771359 - 773803 | 92085.9 |
| enolase | DWX04_03080 | Not Available | Positive | 773969 - 775264 | 46741.8 |
| aaa family atpase | DWX04_03085 | Not Available | Negative | 775369 - 776937 | 60608.1 |
| hypothetical protein | DWX04_03090 | Not Available | Positive | 777586 - 777786 | 7328.03 |
| hypothetical protein | DWX04_03095 | Not Available | Positive | 777826 - 778032 | 8050.69 |
| atp-dependent dna helicase recq | DWX04_03100 | Not Available | Negative | 778135 - 780552 | 91693.1 |
| Trna-thr | Not Available | Not Available | Positive | 780663 - 780736 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

