Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative colanic acid biosynthesis acetyltransferase | DWX04_03010 | Not Available | Positive | 751957 - 752508 | 20806.2 |
| glycosyltransferase family 2 protein | DWX04_03015 | Not Available | Positive | 752501 - 753406 | 35756.9 |
| glycosyltransferase | DWX04_03020 | Not Available | Positive | 753435 - 754253 | 30972.0 |
| gdp-mannose 4,6-dehydratase | DWX04_03025 | Not Available | Positive | 754336 - 755415 | 40974.1 |
| gdp-l-fucose synthase | DWX04_03030 | Not Available | Positive | 755436 - 756518 | 41105.2 |
| mannose-1-phosphate guanylyltransferase | DWX04_03035 | Not Available | Positive | 756533 - 757576 | 39411.4 |
| hypothetical protein | DWX04_03040 | Not Available | Positive | 757580 - 758008 | 16940.2 |
| alpha-rhamnosidase | DWX04_03045 | Not Available | Negative | 758171 - 760315 | 82039.7 |
| right-handed parallel beta-helix repeat-containing protein | DWX04_03050 | Not Available | Negative | 760330 - 762153 | 68666.2 |
| glycoside hydrolase family 127 protein | DWX04_03055 | Not Available | Negative | 762178 - 764283 | 78760.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

